General features
| Gene ID | MYPE8110
|
| Type | CDS
|
| From | 1089516
|
| To | 1088734
|
| Strand | -
|
| General name |
|
| Definition | TatD family DNase
|
| nt length | 783
|
| aa length | 260
|
| m.w. | 30242.49
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN009 yabD hydrolase 11275:12060 | 173 | 4.7e-55
|
| mgen | WP_009885976.1 TatD family hydrolase [Mycoplasma genitalium] | 194 | 3.2e-63
|
| mpul | WP_010924818.1 TatD family hydrolase [Mycoplasma pulmonis] | 134 | 4.6e-40
|
| mmob | WP_011265083.1 TatD family hydrolase [Mycoplasma mobile] | 140 | 3.2e-42
|
| mmyc | NP_975914.1 deoxyribonuclease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 181 | 6.8e-58
|
| mgal | WP_011113981.1 TatD family hydrolase [Mycoplasma gallisepticum] | 186 | 8.9e-60
|
| uure | WP_004026216.1 TatD family hydrolase [Ureaplasma urealyticum] | 147 | 1.1e-44
|
| phyt | WP_011160954.1 MULTISPECIES: TatD family deoxyribonuclease [Candidatus Phytoplasma asteris] | 140 | 1.8e-42
|
| bsub | NP_387920.1 D-amino acyl-tRNA deacylase [Bacillus subtilis subsp. subtilis str. 168] | 157 | 3.4e-48
|
| cace | WP_010966271.1 MULTISPECIES: TatD family hydrolase [Clostridium] | 149 | 3.2e-45
|
| ecoli | NP_415618.1 putative metal-dependent hydrolase YcfH [Escherichia coli str. K-12 substr. MG1655] | 132 | 2.1e-38
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| TatD_DNase | 1 | TatD related DNase | 6-256 | 208.9 | 8e-62
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077633.1| TatD family hydrolase [Mycoplasma penetrans] | 260/260 (100%) | 1371 | 0.0e+00
|
| ref|WP_004025112.1| TatD family hydrolase [Mycoplasma iowae] | 118/257 (45%) | 580 | 6.0e-71
|
| ref|WP_036451703.1| TatD family hydrolase [Mycoplasma iowae] | 118/257 (45%) | 580 | 6.2e-71
|
| ref|WP_027123731.1| TatD family hydrolase [Mycoplasma pirum] | 116/252 (46%) | 558 | 1.0e-67
|
| ref|WP_033160031.1| TatD family hydrolase [Mycoplasma alvi] | 108/252 (42%) | 503 | 2.7e-59
|
| ref|WP_009885976.1| TatD family hydrolase [Mycoplasma genitalium] | 110/255 (43%) | 492 | 1.1e-57
|
| ref|WP_004428550.1| TatD family hydrolase [Mycoplasma yeatsii] | 109/257 (42%) | 492 | 1.3e-57
|
| ref|WP_115558699.1| TatD family hydrolase [Spiroplasma alleghenense] | 111/251 (44%) | 490 | 2.4e-57
|
| ref|WP_042278106.1| TatD family hydrolase [[Clostridium] dakarense] | 109/255 (42%) | 487 | 6.0e-57
|
| ref|WP_020836785.1| TatD family hydrolase [Spiroplasma diminutum] | 111/258 (43%) | 484 | 1.7e-56
|
Maintained by Jun Ishikawa