General features

Gene IDMYPE7940
TypeCDS
From1071849
To1070374
Strand-
General name
Definitionconserved hypotehtical protein
nt length1476
aa length491
m.w.56275.36
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubNP_389583.1 enzyme for ms(2)i(6)A formation for tRNA modification [Bacillus subtilis subsp. subtilis str. 168]5160.0e+00
caceWP_010965143.1 MULTISPECIES: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Clostridium]3831.6e-130
ecoliNP_415194.1 isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli str. K-12 substr. MG1655]3151.2e-103

*bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Radical_SAM1Radical SAM superfamily203-37592.92.8e-26

UPF00041Uncharacterized protein family UPF000456-15687.83.8e-25

TRAM1TRAM domain430-48936.82.8e-09

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077616.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Myc...490/491 (99%)26090.0e+00
ref|WP_044891298.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Myc...486/486 (100%)25860.0e+00
ref|WP_036452624.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Myc...354/479 (73%)20060.0e+00
ref|WP_004025196.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Myc...354/479 (73%)20030.0e+00
ref|WP_033163354.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Sha...268/477 (56%)14680.0e+00
ref|WP_154513958.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Sha...266/477 (55%)14610.0e+00
ref|WP_074731300.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Sha...267/477 (55%)14580.0e+00
ref|WP_006505481.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Cat...265/478 (55%)14460.0e+00
ref|WP_117459260.1| MULTISPECIES: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransfe... [unclassified Ca...265/478 (55%)14420.0e+00
ref|WP_055233754.1| tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Cat...263/478 (55%)14420.0e+00

Maintained by Jun Ishikawa