General features
| Gene ID | MPN659
|
| Type | CDS
|
| From | 784075
|
| To | 783443
|
| Strand | -
|
| General name | trmD
|
| Definition | tRNA (guanine-N1)-methyltransferase
|
| nt length | 633
|
| aa length | 210
|
| m.w. | 23892.29
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1020 trmD tRNA (guanine-N1)-methyltransferase 127608:128288 | 228 | 1.6e-77
|
| mgen | WP_010869485.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma genitalium] | 344 | 7.7e-124
|
| mpul | WP_010925269.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pulmonis] | 183 | 3.0e-60
|
| mmob | WP_041362930.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma mobile] | 187 | 7.8e-62
|
| mmyc | NP_975413.1 tRNA (guanine-N(1)-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 193 | 1.2e-63
|
| mgal | WP_011113884.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma gallisepticum] | 222 | 2.8e-75
|
| uure | WP_004026001.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Ureaplasma urealyticum] | 221 | 5.7e-75
|
| phyt | WP_011160822.1 MULTISPECIES: tRNA (guanosine(37)-N1)-methyltransferase TrmD [Candidatus Phytoplasma asteris] | 181 | 2.6e-59
|
| bsub | NP_389485.1 tRNA(m1G37)methyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 201 | 3.8e-66
|
| cace | WP_010965065.1 MULTISPECIES: tRNA (guanosine(37)-N1)-methyltransferase TrmD [Clostridium] | 191 | 2.7e-62
|
| ecoli | NP_417098.1 tRNA m(1)G37 methyltransferase [Escherichia coli str. K-12 substr. MG1655] | 151 | 1.1e-46
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA_m1G_MT | 1 | tRNA (Guanine-1)-methyltransferase | 2-195 | 250.6 | 9.6e-75
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_017532956.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pneumoniae] | 210/210 (100%) | 1118 | 3.9e-154
|
| ref|WP_010875016.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pneumoniae]... | 210/210 (100%) | 1116 | 4.7e-154
|
| ref|WP_014575049.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pneumoniae] | 209/210 (99%) | 1117 | 7.3e-154
|
| ref|WP_014325666.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pneumoniae] | 209/210 (99%) | 1114 | 1.0e-153
|
| ref|WP_010869485.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma genitalium] | 161/210 (76%) | 883 | 2.6e-118
|
| ref|WP_014894701.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma genitalium] | 160/210 (76%) | 881 | 6.9e-118
|
| ref|WP_009885589.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma genitalium] | 158/208 (75%) | 868 | 4.6e-116
|
| ref|WP_036451576.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma iowae] | 107/205 (52%) | 600 | 2.7e-75
|
| ref|WP_075818550.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Ileibacterium valens] | 109/209 (52%) | 588 | 3.9e-73
|
| ref|WP_100609377.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Entomoplasma freundtii... | 107/197 (54%) | 586 | 6.9e-73
|
Maintained by Jun Ishikawa