General features
| Gene ID | MPN595
|
| Type | CDS
|
| From | 717435
|
| To | 716977
|
| Strand | -
|
| General name | lacA
|
| Definition | galactose-6-phosphate isomerase/ribose 5-phosphate isomerase B
|
| nt length | 459
|
| aa length | 152
|
| m.w. | 16699.13
|
| COG | [G] Carbohydrate transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE680 rpiB/lacA/lacB ribose 5-phosphate and galactose-6-phosphate isomerase 77058:77534 | 100 | 6.0e-29
|
| mgen | WP_009885626.1 ribose 5-phosphate isomerase B [Mycoplasma genitalium] | 214 | 1.2e-74
|
| mpul | WP_010925413.1 ribose 5-phosphate isomerase B [Mycoplasma pulmonis] | 121 | 1.8e-37
|
| mmob | WP_011264890.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Mycoplasma mobile] | 101 | 5.8e-30
|
| mmyc | NP_975864.1 ribose 5-phosphate isomerase RpiB [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 129 | 1.9e-40
|
| mgal | WP_011113370.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Mycoplasma gallisepticum] | 136 | 1.7e-43
|
| uure | WP_012560332.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Ureaplasma urealyticum] | 118 | 1.6e-36
|
| bsub | NP_391573.1 D-ribose 5-phosphate epimerase (promiscuous) [Bacillus subtilis subsp. subtilis str. 168] | 116 | 6.1e-35
|
| cace | WP_010966164.1 MULTISPECIES: ribose 5-phosphate isomerase B [Clostridium] | 131 | 4.7e-41
|
| ecoli | NP_418514.1 allose-6-phosphate isomerase/ribose-5-phosphate isomerase B [Escherichia coli str. K-12 substr. MG1655] | 116 | 4.1e-35
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| LacAB_rpiB | 1 | Ribose/Galactose Isomerase | 7-145 | 165.7 | 5.6e-49
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874952.1| ribose 5-phosphate isomerase B [Mycoplasma pneumoniae] | 152/152 (100%) | 804 | 1.8e-108
|
| ref|WP_009885626.1| ribose 5-phosphate isomerase B [Mycoplasma genitalium] | 100/149 (67%) | 546 | 4.1e-69
|
| ref|WP_025734423.1| RpiB/LacA/LacB family sugar-phosphate isomerase [Entomoplasma luminosu... | 67/140 (47%) | 376 | 2.2e-43
|
| ref|WP_094360610.1| MULTISPECIES: ribose-5-phosphate isomerase [unclassified Propionibacte... | 75/145 (51%) | 377 | 2.3e-43
|
| ref|WP_036448570.1| ribose 5-phosphate isomerase B [Mycoplasma pirum] | 70/146 (47%) | 375 | 5.9e-43
|
| ref|WP_094404104.1| MULTISPECIES: ribose-5-phosphate isomerase [unclassified Propionibacte... | 74/145 (51%) | 373 | 7.8e-43
|
| ref|WP_133625463.1| ribose-5-phosphate isomerase [Ponticoccus gilvus] | 74/145 (51%) | 372 | 1.4e-42
|
| ref|WP_094424799.1| ribose-5-phosphate isomerase [Propionibacteriaceae bacterium NML 06104... | 74/145 (51%) | 370 | 2.8e-42
|
| ref|WP_127680968.1| ribose 5-phosphate isomerase B [Nautilia sp. PV-1] | 69/138 (50%) | 365 | 1.1e-41
|
| ref|WP_061989577.1| ribose 5-phosphate isomerase B [Flammeovirgaceae bacterium 311] | 72/143 (50%) | 364 | 1.3e-41
|
Maintained by Jun Ishikawa