General features
| Gene ID | MPN553
|
| Type | CDS
|
| From | 674751
|
| To | 673057
|
| Strand | -
|
| General name | thrSv
|
| Definition | threonyl-tRNA synthetase
|
| nt length | 1695
|
| aa length | 564
|
| m.w. | 64921.90
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2740 thrS threonyl-tRNA synthetase 362935:361235 | 432 | 1.2e-147
|
| mgen | WP_010869457.1 threonine--tRNA ligase [Mycoplasma genitalium] | 805 | 0.0e+00
|
| mpul | WP_010925547.1 threonine--tRNA ligase [Mycoplasma pulmonis] | 402 | 7.8e-136
|
| mmob | WP_011265088.1 threonine--tRNA ligase [Mycoplasma mobile] | 394 | 9.1e-133
|
| mmyc | NP_975261.1 threonyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 407 | 9.4e-137
|
| mgal | WP_011113407.1 threonine--tRNA ligase [Mycoplasma gallisepticum] | 508 | 3.6e-177
|
| uure | WP_004026328.1 threonine--tRNA ligase [Ureaplasma urealyticum] | 461 | 9.1e-159
|
| bsub | NP_390773.1 threonyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 402 | 3.1e-134
|
| cace | WP_010965659.1 MULTISPECIES: threonine--tRNA ligase [Clostridium] | 291 | 7.6e-92
|
| ecoli | NP_416234.1 threonine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 275 | 2.7e-85
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 249-458 | 106.4 | 1.6e-30
|
| HGTP_anticodon | 1 | Anticodon binding domain | 471-562 | 66.9 | 1.3e-18
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874910.1| threonine--tRNA ligase [Mycoplasma pneumoniae] | 564/564 (100%) | 3015 | 0.0e+00
|
| ref|WP_058158217.1| threonine--tRNA ligase [Mycoplasma pneumoniae] | 563/564 (99%) | 3012 | 0.0e+00
|
| ref|WP_098363681.1| threonine--tRNA ligase [Mycoplasma pneumoniae] | 562/563 (99%) | 2994 | 0.0e+00
|
| ref|WP_014894493.1| threonine--tRNA ligase [Mycoplasma genitalium] | 374/564 (66%) | 2085 | 0.0e+00
|
| ref|WP_010869457.1| threonine--tRNA ligase [Mycoplasma genitalium] | 373/564 (66%) | 2080 | 0.0e+00
|
| ref|WP_052663579.1| threonine--tRNA ligase [Mycoplasma testudinis] | 274/560 (48%) | 1444 | 0.0e+00
|
| ref|WP_052663062.1| threonine--tRNA ligase [Mycoplasma pirum] | 272/555 (49%) | 1397 | 0.0e+00
|
| ref|WP_033160271.1| threonine--tRNA ligase [Mycoplasma alvi] | 260/560 (46%) | 1353 | 1.1e-178
|
| ref|WP_014574454.1| threonine--tRNA ligase [Mycoplasma gallisepticum] | 259/560 (46%) | 1310 | 3.0e-172
|
| ref|WP_011883926.1| threonine--tRNA ligase [Mycoplasma gallisepticum] | 259/560 (46%) | 1310 | 3.5e-172
|
Maintained by Jun Ishikawa