General features
| Gene ID | MPN550
|
| Type | CDS
|
| From | 671416
|
| To | 670253
|
| Strand | -
|
| General name |
|
| Definition | Thiamin biosynthesis protein
|
| nt length | 1164
|
| aa length | 387
|
| m.w. | 43340.52
|
| COG | [H] Coenzyme metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5860 thiI thiamin biosynthesis protein 740396:739245 | 236 | 5.5e-76
|
| mgen | WP_009885937.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma genitalium] | 514 | 0.0e+00
|
| mpul | WP_010925519.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pulmonis] | 185 | 1.3e-56
|
| mmob | WP_041362743.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma mobile] | 194 | 6.3e-60
|
| mmyc | NP_975279.1 thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 198 | 2.2e-61
|
| mgal | WP_011113749.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma gallisepticum] | 286 | 1.1e-95
|
| uure | WP_004025624.1 tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma urealyticum] | 245 | 1.3e-79
|
| phyt | WP_011160518.1 tRNA 4-thiouridine(8) synthase ThiI [Onion yellows phytoplasma] | 185 | 2.4e-56
|
| bsub | NP_390836.2 persulfide ATP pyrophosphatase involved in tRNA modification [Bacillus subtilis subsp. subtilis str. 168] | 165 | 3.0e-48
|
| cace | WP_010966254.1 MULTISPECIES: tRNA 4-thiouridine(8) synthase ThiI [Clostridium] | 167 | 2.8e-49
|
| ecoli | NP_414957.1 tRNA uridine 4-sulfurtransferase [Escherichia coli str. K-12 substr. MG1655] | 142 | 4.9e-39
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| ThiI | 1 | Thiamine biosynthesis protein (ThiI) | 177-371 | 266.9 | 9.2e-80
|
| THUMP | 1 | THUMP domain | 34-165 | 67.2 | 1.5e-18
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874907.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pneumoniae] | 387/387 (100%) | 2041 | 0.0e+00
|
| ref|WP_159203854.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pneumoniae] | 386/387 (99%) | 2037 | 0.0e+00
|
| ref|WP_159201731.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pneumoniae] | 386/387 (99%) | 2036 | 0.0e+00
|
| ref|WP_161609633.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pneumoniae] | 386/387 (99%) | 2035 | 0.0e+00
|
| ref|WP_054173824.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pneumoniae] | 386/387 (99%) | 2035 | 0.0e+00
|
| ref|WP_009885937.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma genitalium] | 249/387 (64%) | 1324 | 5.5e-180
|
| ref|WP_065165227.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma gallisepticum] | 146/377 (38%) | 741 | 1.5e-91
|
| ref|WP_014886134.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma gallisepticum] | 147/377 (38%) | 740 | 2.4e-91
|
| ref|WP_036498923.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma testudinis] | 154/374 (41%) | 739 | 4.7e-91
|
| ref|WP_151059752.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma gallisepticum] | 146/377 (38%) | 736 | 7.8e-91
|
Maintained by Jun Ishikawa