General features
| Gene ID | MPN538
|
| Type | CDS
|
| From | 659782
|
| To | 660267
|
| Strand | +
|
| General name | rplJ
|
| Definition | ribosomal protein L10
|
| nt length | 486
|
| aa length | 161
|
| m.w. | 17617.52
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5740 rplJ ribosomal protein L10 728477:727920 | 96 | 3.0e-27
|
| mgen | WP_009885818.1 50S ribosomal protein L10 [Mycoplasma genitalium] | 252 | 2.5e-89
|
| mpul | WP_041364021.1 50S ribosomal protein L10 [Mycoplasma pulmonis] | 39 | 4.8e-06
|
| mmob | WP_011265053.1 50S ribosomal protein L10 [Mycoplasma mobile] | 55 | 9.0e-12
|
| mmyc | NP_975971.1 50S ribosomal protein L10 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 64 | 3.4e-15
|
| mgal | WP_011113376.1 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 138 | 5.3e-44
|
| uure | WP_004025606.1 50S ribosomal protein L10 [Ureaplasma urealyticum] | 94 | 1.1e-26
|
| phyt | WP_011160632.1 50S ribosomal protein L10 [Onion yellows phytoplasma] | 63 | 6.1e-15
|
| bsub | NP_387985.2 ribosomal protein L10 (BL5) [Bacillus subtilis subsp. subtilis str. 168] | 78 | 5.4e-20
|
| cace | WP_010966423.1 MULTISPECIES: 50S ribosomal protein L10 [Clostridium] | 73 | 6.4e-18
|
| ecoli | NP_418412.1 50S ribosomal subunit protein L10 [Escherichia coli str. K-12 substr. MG1655] | 44 | 4.2e-07
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L10 | 1 | Ribosomal protein L10 | 3-97 | 63.8 | 1.3e-17
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874895.1| 50S ribosomal protein L10 [Mycoplasma pneumoniae] | 161/161 (100%) | 823 | 5.2e-111
|
| ref|WP_009885818.1| 50S ribosomal protein L10 [Mycoplasma genitalium] | 120/161 (74%) | 644 | 8.4e-84
|
| ref|WP_027122363.1| 50S ribosomal protein L10 [Mycoplasma imitans] | 69/155 (44%) | 355 | 9.0e-40
|
| ref|WP_081275326.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 67/151 (44%) | 350 | 5.5e-39
|
| ref|WP_011113376.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 68/155 (43%) | 348 | 1.1e-38
|
| ref|WP_027123910.1| 50S ribosomal protein L10 [Mycoplasma pirum] | 69/157 (43%) | 345 | 3.0e-38
|
| ref|WP_151029667.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 67/155 (43%) | 345 | 3.6e-38
|
| ref|WP_151059582.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 66/153 (43%) | 344 | 4.6e-38
|
| ref|WP_014885871.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 65/153 (42%) | 343 | 6.5e-38
|
| ref|WP_014574435.1| 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 67/155 (43%) | 340 | 1.9e-37
|
Maintained by Jun Ishikawa