General features
| Gene ID | MPN531
|
| Type | CDS
|
| From | 653949
|
| To | 651802
|
| Strand | -
|
| General name | clpB
|
| Definition | ATP-dependent protease binding subunit ClpB
|
| nt length | 2148
|
| aa length | 715
|
| m.w. | 81395.15
|
| COG | [O] Posttranslational modification, protein turnover, chaperones
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3790 clpB ATP-dependent ClpB protease 490482:488365 | 794 | 0.0e+00
|
| mgen | WP_010869446.1 AAA domain-containing protein [Mycoplasma genitalium] | 1204 | 0.0e+00
|
| mmob | WP_011264885.1 AAA domain-containing protein [Mycoplasma mobile] | 704 | 0.0e+00
|
| mmyc | NP_975593.1 ATP dependent protease ClpB [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 713 | 0.0e+00
|
| mgal | WP_011113741.1 AAA domain-containing protein [Mycoplasma gallisepticum] | 855 | 0.0e+00
|
| uure | WP_004026608.1 AAA domain-containing protein [Ureaplasma urealyticum] | 793 | 0.0e+00
|
| bsub | NP_387967.1 class III stress response-related ATPase, AAA+ superfamily [Bacillus subtilis subsp. subtilis str. 168] | 575 | 0.0e+00
|
| cace | WP_010964277.1 MULTISPECIES: ATP-dependent chaperone ClpB [Clostridium] | 685 | 0.0e+00
|
| ecoli | NP_417083.1 ClpB chaperone [Escherichia coli str. K-12 substr. MG1655] | 682 | 0.0e+00
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| AAA_2 | 1 | AAA domain (Cdc48 subfamily) | 457-613 | 192.9 | 4.4e-57
|
| AAA_lid_9 | 1 | AAA lid domain | 198-296 | 104.9 | 1.8e-30
|
| AAA | 2 | ATPase family associated with various cellular activities (AAA) | 57-175, 463-581 | 100.3 | 1.1e-28
|
| AAA_5 | 1 | AAA domain (dynein-related subfamily) | 462-583 | 72.0 | 4.8e-20
|
| ClpB_D2-small | 1 | C-terminal, D2-small domain, of ClpB protein | 619-695 | 64.9 | 5.1e-18
|
| Sigma54_activat | 1 | Sigma-54 interaction domain | 462-611 | 44.3 | 1.5e-11
|
| TniB | 1 | Bacterial TniB protein | 40-193 | 35.9 | 4.7e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874888.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 715/715 (100%) | 3740 | 0.0e+00
|
| ref|WP_086131711.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 714/715 (99%) | 3735 | 0.0e+00
|
| ref|WP_014325586.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 714/715 (99%) | 3732 | 0.0e+00
|
| ref|WP_161609632.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 714/715 (99%) | 3732 | 0.0e+00
|
| ref|WP_054173280.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 715/715 (100%) | 3728 | 0.0e+00
|
| ref|WP_086122274.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 713/715 (99%) | 3724 | 0.0e+00
|
| ref|WP_054173792.1| chaperone protein ClpB [Mycoplasma pneumoniae] | 714/715 (99%) | 3720 | 0.0e+00
|
| ref|WP_014894484.1| AAA domain-containing protein [Mycoplasma genitalium] | 590/711 (82%) | 3120 | 0.0e+00
|
| ref|WP_010869446.1| AAA domain-containing protein [Mycoplasma genitalium] | 589/711 (82%) | 3116 | 0.0e+00
|
| ref|WP_014894678.1| AAA domain-containing protein [Mycoplasma genitalium] | 589/711 (82%) | 3112 | 0.0e+00
|
Maintained by Jun Ishikawa