General features
| Gene ID | MPN480
|
| Type | CDS
|
| From | 585919
|
| To | 583403
|
| Strand | -
|
| General name | valS
|
| Definition | valyl-tRNA synthetase
|
| nt length | 2517
|
| aa length | 838
|
| m.w. | 95718.97
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE420 valS valyl-tRNA synthetase 49185:51803 | 622 | 0.0e+00
|
| mgen | WP_010869437.1 valine--tRNA ligase [Mycoplasma genitalium] | 1153 | 0.0e+00
|
| mpul | WP_010925061.1 valine--tRNA ligase [Mycoplasma pulmonis] | 499 | 1.8e-166
|
| mmob | WP_011264678.1 valine--tRNA ligase [Mycoplasma mobile] | 511 | 4.2e-171
|
| mmyc | NP_975302.1 valyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 603 | 0.0e+00
|
| mgal | WP_011113825.1 valine--tRNA ligase [Mycoplasma gallisepticum] | 658 | 0.0e+00
|
| uure | WP_004025784.1 valine--tRNA ligase [Ureaplasma urealyticum] | 587 | 0.0e+00
|
| bsub | NP_390687.2 valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 609 | 0.0e+00
|
| cace | WP_010965695.1 MULTISPECIES: valine--tRNA ligase [Clostridium] | 571 | 0.0e+00
|
| ecoli | NP_418679.1 valine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 449 | 2.8e-145
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1 | 1 | tRNA synthetases class I (I, L, M and V) | 20-550 | 522.9 | 8.8e-157
|
| Anticodon_1 | 1 | Anticodon-binding domain of tRNA | 596-733 | 90.7 | 8.6e-26
|
| tRNA-synt_1g | 2 | tRNA synthetases class I (M) | 48-185, 359-570 | 86.9 | 1.2e-24
|
| tRNA-synt_1_2 | 1 | Leucyl-tRNA synthetase, Domain 2 | 244-304 | 43.9 | 1.8e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874836.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 838/838 (100%) | 4477 | 0.0e+00
|
| ref|WP_159227402.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 837/838 (99%) | 4476 | 0.0e+00
|
| ref|WP_014325560.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 835/838 (99%) | 4464 | 0.0e+00
|
| ref|WP_159203873.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 834/838 (99%) | 4461 | 0.0e+00
|
| ref|WP_054175499.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 834/838 (99%) | 4458 | 0.0e+00
|
| ref|WP_086137881.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 834/838 (99%) | 4455 | 0.0e+00
|
| ref|WP_054175834.1| valine--tRNA ligase [Mycoplasma pneumoniae] | 835/838 (99%) | 4452 | 0.0e+00
|
| ref|WP_010869437.1| valine--tRNA ligase [Mycoplasma genitalium] | 549/837 (65%) | 2982 | 0.0e+00
|
| ref|WP_014894037.1| valine--tRNA ligase [Mycoplasma genitalium] | 548/837 (65%) | 2971 | 0.0e+00
|
| ref|WP_014894475.1| valine--tRNA ligase [Mycoplasma genitalium] | 548/837 (65%) | 2969 | 0.0e+00
|
Maintained by Jun Ishikawa