General features

Gene IDMYPE4540
TypeCDS
From588932
To591994
Strand+
General name
DefinitionPTS transporter subunit IIB
nt length3063
aa length1020
m.w.113306.43
COG[G] Carbohydrate transport and metabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmycNP_975625.1 PTS system-sucrose-specific transporter subunit IIBC [Mycoplasma mycoides subsp. mycoides SC str. PG1]1412.5e-36
caceWP_010964716.1 MULTISPECIES: PTS transporter subunit EIIC [Clostridium]1001.5e-22

*mmyc, Mycoplasma mycoides; cace, Clostridium acetobutylicum;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

PTS_EIIA_11phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 118-145113.74.4e-33

PTS_EIIC1Phosphotransferase system, EIIC320-63871.08.8e-20

PTS_EIIB1phosphotransferase system, EIIB203-23435.74.3e-09

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_129374400.1| PTS transporter subunit EIIC [Mycoplasma penetrans]1019/1020 (99%)53520.0e+00
ref|WP_044891251.1| PTS transporter subunit EIIC [Mycoplasma penetrans]1009/1009 (100%)52920.0e+00
ref|WP_011183209.1| PTS transporter subunit EIIC [Mesoplasma florum] 249/737 (33%)11175.2e-134
ref|WP_106078532.1| PTS transporter subunit EIIC [Mesoplasma coleopterae]252/747 (33%)11132.1e-133
ref|WP_100916709.1| PTS transporter subunit EIIC [Spiroplasma floricola]263/762 (34%)10912.1e-130
ref|WP_162684923.1| PTS transporter subunit EIIC [Spiroplasma sp. BIUS-1]292/857 (34%)10774.0e-128
ref|WP_025362990.1| PTS transporter subunit EIIC [Spiroplasma culicicola]256/709 (36%)10684.2e-127
ref|WP_100254796.1| PTS transporter subunit EIIC [Spiroplasma clarkii]310/872 (35%)10615.2e-126
ref|WP_146638036.1| PTS transporter subunit EIIC [Spiroplasma clarkii]312/879 (35%)10601.3e-125
ref|WP_101780780.1| PTS transporter subunit EIIC [Spiroplasma monobiae]266/756 (35%)10512.4e-124

Maintained by Jun Ishikawa