General features

Gene IDMYPE4490
TypeCDS
From584304
To584594
Strand+
General name
DefinitionPTS transporter subunit IIB
nt length291
aa length96
m.w.10360.76
COG[G] Carbohydrate transport and metabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubNP_391907.2 conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]301.7e-02
caceWP_010965503.1 MULTISPECIES: flagellar filament capping protein FliD [Clostridium]262.2e-01

*bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

PTS_IIB1PTS system, Lactose/Cellobiose specific IIB subunit3-8540.43.7e-10

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077273.1| PTS sugar transporter subunit IIB [Mycoplasma penetrans]96/96 (100%)4823.9e-61
ref|WP_095334560.1| PTS sugar transporter subunit IIB [Mycoplasma agassizii]60/90 (66%)2967.5e-33
ref|WP_084232370.1| PTS sugar transporter subunit IIB [Mycoplasma agassizii]59/90 (65%)2951.2e-32
ref|WP_027120157.1| PTS sugar transporter subunit IIB [Mycoplasma testudinis]56/92 (60%)2854.4e-31
ref|WP_004024959.1| PTS sugar transporter subunit IIB [Mycoplasma iowae]48/93 (51%)2402.7e-24
ref|WP_100254329.1| PTS sugar transporter subunit IIB [Spiroplasma clarkii]46/94 (48%)2282.0e-22
ref|WP_041618862.1| hypothetical protein [Spiroplasma taiwanense]49/91 (53%)2124.5e-20
ref|WP_069117320.1| hypothetical protein [Spiroplasma helicoides]48/91 (52%)2125.0e-20
ref|WP_129910088.1| PTS ascorbate-specific subunit IIBC [Mycoplasma mycoides]50/88 (56%)2296.8e-20
ref|WP_020862676.1| PTS ascorbate-specific subunit IIBC [Mycoplasma mycoides]50/88 (56%)2296.8e-20

Maintained by Jun Ishikawa