General features
| Gene ID | MYPE4440
|
| Type | CDS
|
| From | 580240
|
| To | 580527
|
| Strand | +
|
| General name | rpmA
|
| Definition | ribosomal protein L27
|
| nt length | 288
|
| aa length | 95
|
| m.w. | 10464.20
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN327 rpmA ribosomal protein L27 386427:386741 | 127 | 1.3e-41
|
| mgen | WP_009885771.1 50S ribosomal protein L27 [Mycoplasma genitalium] | 124 | 1.4e-40
|
| mpul | WP_010925133.1 50S ribosomal protein L27 [Mycoplasma pulmonis] | 87 | 4.3e-26
|
| mmob | WP_011264825.1 50S ribosomal protein L27 [Mycoplasma mobile] | 88 | 2.0e-26
|
| mmyc | NP_975544.1 50S ribosomal protein L27 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 124 | 2.7e-40
|
| mgal | WP_011113615.1 50S ribosomal protein L27 [Mycoplasma gallisepticum] | 137 | 2.0e-45
|
| uure | WP_012560236.1 50S ribosomal protein L27 [Ureaplasma urealyticum] | 131 | 3.7e-43
|
| phyt | WP_011160463.1 MULTISPECIES: 50S ribosomal protein L27 [Candidatus Phytoplasma asteris] | 112 | 8.9e-36
|
| bsub | NP_390672.1 ribosomal protein L27 (BL24) [Bacillus subtilis subsp. subtilis str. 168] | 127 | 4.7e-41
|
| cace | WP_010964571.1 MULTISPECIES: 50S ribosomal protein L27 [Clostridium] | 107 | 3.0e-33
|
| ecoli | NP_417652.1 50S ribosomal subunit protein L27 [Escherichia coli str. K-12 substr. MG1655] | 85 | 2.3e-24
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L27 | 1 | Ribosomal L27 protein | 13-92 | 120.2 | 2.8e-35
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077268.1| 50S ribosomal protein L27 [Mycoplasma penetrans] | 95/95 (100%) | 477 | 2.3e-60
|
| ref|WP_004024961.1| 50S ribosomal protein L27 [Mycoplasma iowae] | 75/89 (84%) | 393 | 1.7e-47
|
| ref|WP_159402925.1| 50S ribosomal protein L27 [Mycoplasma iowae] | 71/82 (86%) | 370 | 3.6e-44
|
| ref|WP_052663085.1| 50S ribosomal protein L27 [Mycoplasma pirum] | 69/87 (79%) | 348 | 1.4e-40
|
| ref|WP_052663912.1| 50S ribosomal protein L27 [Mycoplasma alvi] | 68/87 (78%) | 348 | 1.6e-40
|
| ref|WP_014574615.1| 50S ribosomal protein L27 [Mycoplasma gallisepticum] | 67/90 (74%) | 346 | 2.2e-40
|
| ref|WP_027121872.1| 50S ribosomal protein L27 [Mycoplasma imitans] | 66/89 (74%) | 345 | 3.0e-40
|
| ref|WP_011113615.1| 50S ribosomal protein L27 [Mycoplasma gallisepticum] | 67/89 (75%) | 344 | 4.2e-40
|
| ref|WP_065165703.1| 50S ribosomal protein L27 [Mycoplasma gallisepticum] | 66/89 (74%) | 343 | 6.5e-40
|
| ref|WP_038102798.1| 50S ribosomal protein L27 [Ureaplasma diversum] | 67/93 (72%) | 341 | 1.3e-39
|
Maintained by Jun Ishikawa