General features
| Gene ID | MPN418
|
| Type | CDS
|
| From | 503721
|
| To | 503299
|
| Strand | -
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 423
|
| aa length | 140
|
| m.w. | 15903.34
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE8530 holiday junction resolvase RuvX 1147238:1146810 | 57 | 5.4e-13
|
| mgen | WP_010869411.1 Holliday junction resolvase RuvX [Mycoplasma genitalium] | 169 | 3.1e-57
|
| mpul | WP_010925357.1 Holliday junction resolvase RuvX [Mycoplasma pulmonis] | 53 | 1.7e-11
|
| mmob | WP_011264958.1 Holliday junction resolvase RuvX [Mycoplasma mobile] | 44 | 2.5e-08
|
| mmyc | NP_975254.1 hypothetical protein MSC_0255 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 42 | 2.7e-07
|
| mgal | WP_011113352.1 Holliday junction resolvase RuvX [Mycoplasma gallisepticum] | 44 | 5.3e-08
|
| uure | WP_004025684.1 Holliday junction resolvase RuvX [Ureaplasma urealyticum] | 27 | 4.4e-02
|
| bsub | NP_390617.1 pre-16S ribosomal RNA maturation enzyme [Bacillus subtilis subsp. subtilis str. 168] | 49 | 2.4e-09
|
| cace | WP_010964987.1 Holliday junction resolvase RuvX [Clostridium acetobutylicum] | 58 | 9.1e-13
|
| ecoli | NP_417424.1 ribonuclease H-like domain containing nuclease [Escherichia coli str. K-12 substr. MG1655] | 50 | 1.6e-09
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RuvX | 1 | Holliday junction resolvase | 3-135 | 91.6 | 5.3e-26
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874774.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 139/140 (99%) | 721 | 3.3e-96
|
| ref|WP_159203411.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 138/140 (98%) | 720 | 5.9e-96
|
| ref|WP_014325523.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 138/140 (98%) | 717 | 1.3e-95
|
| ref|WP_098363668.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 138/140 (98%) | 714 | 3.9e-95
|
| ref|WP_019830455.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 137/140 (97%) | 713 | 6.9e-95
|
| ref|WP_159204645.1| Holliday junction resolvase RuvX [Mycoplasma pneumoniae] | 137/140 (97%) | 710 | 1.7e-94
|
| ref|WP_010869411.1| Holliday junction resolvase RuvX [Mycoplasma genitalium] | 81/134 (60%) | 429 | 1.0e-51
|
| ref|WP_014894266.1| Holliday junction resolvase RuvX [Mycoplasma genitalium] | 81/134 (60%) | 428 | 1.4e-51
|
| ref|WP_014894022.1| Holliday junction resolvase RuvX [Mycoplasma genitalium] | 81/134 (60%) | 426 | 2.7e-51
|
| ref|WP_013943300.1| Holliday junction resolvase RuvX [Simkania negevensis] | 45/132 (34%) | 198 | 9.9e-17
|
Maintained by Jun Ishikawa