General features
| Gene ID | MYPE3790
|
| Type | CDS
|
| From | 490482
|
| To | 488365
|
| Strand | -
|
| General name | clpB
|
| Definition | ATP-dependent ClpB protease
|
| nt length | 2118
|
| aa length | 705
|
| m.w. | 80956.54
|
| COG | [O] Posttranslational modification, protein turnover, chaperones
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN531 clpB ATP-dependent protease binding subunit ClpB 653949:651802 | 794 | 0.0e+00
|
| mgen | WP_010869446.1 AAA domain-containing protein [Mycoplasma genitalium] | 793 | 0.0e+00
|
| mmob | WP_011264885.1 AAA domain-containing protein [Mycoplasma mobile] | 703 | 0.0e+00
|
| mmyc | NP_975593.1 ATP dependent protease ClpB [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 724 | 0.0e+00
|
| mgal | WP_011113741.1 AAA domain-containing protein [Mycoplasma gallisepticum] | 821 | 0.0e+00
|
| uure | WP_004026608.1 AAA domain-containing protein [Ureaplasma urealyticum] | 749 | 0.0e+00
|
| bsub | NP_387967.1 class III stress response-related ATPase, AAA+ superfamily [Bacillus subtilis subsp. subtilis str. 168] | 592 | 0.0e+00
|
| cace | WP_010964277.1 MULTISPECIES: ATP-dependent chaperone ClpB [Clostridium] | 676 | 0.0e+00
|
| ecoli | NP_417083.1 ClpB chaperone [Escherichia coli str. K-12 substr. MG1655] | 673 | 0.0e+00
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| AAA_2 | 1 | AAA domain (Cdc48 subfamily) | 450-606 | 184.6 | 1.5e-54
|
| AAA_lid_9 | 1 | AAA lid domain | 198-297 | 102.6 | 9.2e-30
|
| AAA | 2 | ATPase family associated with various cellular activities (AAA) | 56-190, 456-573 | 102.5 | 2.3e-29
|
| ClpB_D2-small | 1 | C-terminal, D2-small domain, of ClpB protein | 616-686 | 74.9 | 3.8e-21
|
| AAA_5 | 1 | AAA domain (dynein-related subfamily) | 455-575 | 73.0 | 2.2e-20
|
| Sigma54_activat | 1 | Sigma-54 interaction domain | 454-573 | 53.0 | 3.2e-14
|
| TniB | 1 | Bacterial TniB protein | 39-193 | 39.3 | 4.4e-10
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077204.1| AAA domain-containing protein [Mycoplasma penetrans] | 705/705 (100%) | 3632 | 0.0e+00
|
| ref|WP_129374587.1| AAA domain-containing protein [Mycoplasma penetrans] | 703/705 (99%) | 3617 | 0.0e+00
|
| ref|WP_004024539.1| AAA domain-containing protein [Mycoplasma iowae] | 508/703 (72%) | 2695 | 0.0e+00
|
| ref|WP_036451347.1| AAA domain-containing protein [Mycoplasma iowae] | 507/703 (72%) | 2692 | 0.0e+00
|
| ref|WP_036499028.1| AAA domain-containing protein [Mycoplasma testudinis] | 401/689 (58%) | 2122 | 0.0e+00
|
| ref|WP_014886127.1| AAA domain-containing protein [Mycoplasma gallisepticum] | 412/694 (59%) | 2121 | 0.0e+00
|
| ref|WP_027122023.1| AAA domain-containing protein [Mycoplasma imitans] | 411/694 (59%) | 2121 | 0.0e+00
|
| ref|WP_011113741.1| AAA domain-containing protein [Mycoplasma gallisepticum] | 410/694 (59%) | 2120 | 0.0e+00
|
| ref|WP_065170003.1| AAA domain-containing protein [Mycoplasma gallisepticum] | 411/694 (59%) | 2119 | 0.0e+00
|
| ref|WP_151029876.1| AAA domain-containing protein [Mycoplasma gallisepticum] | 409/694 (58%) | 2117 | 0.0e+00
|
Maintained by Jun Ishikawa