General features

Gene IDMPN342
TypeCDS
From407861
To409492
Strand+
General namehsdM
Definitiontype I restriction enzyme HsdM
nt length1632
aa length543
m.w.61974.36
COG[V] Defense mechanisms

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE8210 hsdM type I restriction-modification system M subunit 1101637:11001651042.5e-25
mpulWP_010925479.1 type I restriction-modification system subunit M [Mycoplasma pulmonis]2712.7e-86
mmobWP_011264806.1 type I restriction-modification system subunit M [Mycoplasma mobile]5141.4e-180
mgalWP_011113943.1 type I restriction-modification system subunit M [Mycoplasma gallisepticum]2681.4e-81
uureWP_012560330.1 type I restriction-modification system subunit M [Ureaplasma urealyticum]1593.1e-44
phytWP_011160968.1 type I restriction-modification system methyltransferase subunit [Onion yellows phytoplasma]613.1e-13
bsubNP_390826.1 putative nucleic acid methyltransferase [Bacillus subtilis subsp. subtilis str. 168]402.6e-04
caceWP_010966800.1 MULTISPECIES: restriction endonuclease subunit M [Clostridium]351.2e-02
ecoliNP_418769.1 type I restriction enzyme EcoKI methyltransferase component [Escherichia coli str. K-12 substr. MG1655]813.1e-17

*mype, Mycoplasma penetrans; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

N6_Mtase1N-6 DNA Methylase183-500392.21.7e-117

HsdM_N1HsdM N-terminal domain13-16960.52.6e-16

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874698.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...543/543 (100%)28570.0e+00
ref|WP_017532903.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...542/543 (99%)28560.0e+00
ref|WP_159202592.1| type I restriction-modification system subunit M, partial [Mycoplasma ...542/543 (99%)28540.0e+00
ref|WP_014325473.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...541/543 (99%)28530.0e+00
ref|WP_159202573.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...541/543 (99%)28510.0e+00
ref|WP_159204509.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...541/543 (99%)28510.0e+00
ref|WP_019830465.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...540/543 (99%)28430.0e+00
ref|WP_159201607.1| type I restriction-modification system subunit M [Mycoplasma pneumonia...539/543 (99%)28400.0e+00
ref|WP_159204853.1| type I restriction-modification system subunit M, partial [Mycoplasma ...538/540 (99%)28370.0e+00
ref|WP_159204955.1| type I restriction-modification system subunit M, partial [Mycoplasma ...538/539 (99%)28340.0e+00

Maintained by Jun Ishikawa