General features
| Gene ID | MYPE3390
|
| Type | CDS
|
| From | 440246
|
| To | 441634
|
| Strand | +
|
| General name | glyS
|
| Definition | glycyl-tRNA synthetase
|
| nt length | 1389
|
| aa length | 462
|
| m.w. | 53925.13
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN354 grs1 glycyl-tRNA synthetase 423488:422139 | 501 | 4.6e-178
|
| mgen | WP_010869392.1 glycine--tRNA ligase [Mycoplasma genitalium] | 464 | 1.5e-163
|
| mpul | WP_041364410.1 glycine--tRNA ligase [Mycoplasma pulmonis] | 484 | 2.1e-171
|
| mmob | WP_011264812.1 glycine--tRNA ligase [Mycoplasma mobile] | 454 | 1.6e-159
|
| mmyc | NP_975450.1 glycyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 504 | 8.2e-179
|
| mgal | WP_011113637.1 glycine--tRNA ligase [Mycoplasma gallisepticum] | 562 | 0.0e+00
|
| uure | WP_004025511.1 glycine--tRNA ligase [Ureaplasma urealyticum] | 571 | 0.0e+00
|
| phyt | WP_011160975.1 glycine--tRNA ligase [Onion yellows phytoplasma] | 434 | 8.9e-152
|
| cace | WP_010966472.1 MULTISPECIES: glycine--tRNA ligase [Clostridium] | 502 | 1.3e-177
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| HGTP_anticodon | 1 | Anticodon binding domain | 368-449 | 69.6 | 1.9e-19
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 159-340 | 48.9 | 7.3e-13
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077168.1| glycine--tRNA ligase [Mycoplasma penetrans] | 462/462 (100%) | 2442 | 0.0e+00
|
| ref|WP_036452206.1| glycine--tRNA ligase [Mycoplasma iowae] | 327/455 (71%) | 1737 | 0.0e+00
|
| ref|WP_027119949.1| glycine--tRNA ligase [Mycoplasma testudinis] | 271/444 (61%) | 1517 | 0.0e+00
|
| ref|WP_027121897.1| glycine--tRNA ligase [Mycoplasma imitans] | 283/445 (63%) | 1480 | 0.0e+00
|
| ref|WP_016829267.1| glycine--tRNA ligase [Ureaplasma urealyticum] | 274/445 (61%) | 1472 | 0.0e+00
|
| ref|WP_004025511.1| glycine--tRNA ligase [Ureaplasma urealyticum] | 274/445 (61%) | 1471 | 0.0e+00
|
| ref|WP_141918118.1| glycine--tRNA ligase [Ureaplasma urealyticum] | 274/445 (61%) | 1471 | 0.0e+00
|
| ref|WP_004027418.1| glycine--tRNA ligase [Ureaplasma urealyticum] | 273/445 (61%) | 1465 | 0.0e+00
|
| ref|WP_006688822.1| glycine--tRNA ligase [Ureaplasma parvum] | 271/454 (59%) | 1458 | 0.0e+00
|
| ref|WP_014886040.1| glycine--tRNA ligase [Mycoplasma gallisepticum] | 276/446 (61%) | 1456 | 0.0e+00
|
Maintained by Jun Ishikawa