General features
| Gene ID | MYPE290
|
| Type | CDS
|
| From | 39162
|
| To | 39584
|
| Strand | +
|
| General name | rpsL
|
| Definition | ribosomal protein S12
|
| nt length | 423
|
| aa length | 140
|
| m.w. | 15974.50
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN225 rpsL ribosomal protein S12 276697:277116 | 205 | 4.0e-71
|
| mgen | WP_010869326.1 30S ribosomal protein S12 [Mycoplasma genitalium] | 219 | 4.8e-77
|
| mpul | WP_010925231.1 30S ribosomal protein S12 [Mycoplasma pulmonis] | 191 | 1.4e-65
|
| mmob | WP_011264889.1 30S ribosomal protein S12 [Mycoplasma mobile] | 203 | 1.9e-70
|
| mmyc | NP_975160.3 30S ribosomal protein S12 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 199 | 1.1e-68
|
| mgal | WP_011113788.1 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 234 | 2.0e-82
|
| uure | WP_004026220.1 MULTISPECIES: 30S ribosomal protein S12 [Ureaplasma] | 231 | 2.6e-81
|
| phyt | WP_011160636.1 MULTISPECIES: 30S ribosomal protein S12 [Candidatus Phytoplasma] | 189 | 3.7e-65
|
| bsub | NP_387991.2 ribosomal protein S12 (BS12) [Bacillus subtilis subsp. subtilis str. 168] | 204 | 6.2e-70
|
| cace | WP_010966418.1 MULTISPECIES: 30S ribosomal protein S12 [Clostridium] | 177 | 1.9e-59
|
| ecoli | NP_417801.1 30S ribosomal subunit protein S12 [Escherichia coli str. K-12 substr. MG1655] | 169 | 2.5e-56
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosom_S12_S23 | 1 | Ribosomal protein S12/S23 | 32-136 | 125.0 | 1e-36
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076855.1| 30S ribosomal protein S12 [Mycoplasma penetrans] | 140/140 (100%) | 730 | 1.5e-97
|
| ref|WP_004025348.1| 30S ribosomal protein S12 [Mycoplasma iowae] | 118/137 (86%) | 634 | 7.3e-83
|
| ref|WP_027121842.1| 30S ribosomal protein S12 [Mycoplasma imitans] | 117/140 (83%) | 602 | 5.1e-78
|
| ref|WP_011113788.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 116/140 (82%) | 596 | 4.3e-77
|
| ref|WP_065170005.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 115/140 (82%) | 593 | 1.2e-76
|
| ref|WP_151029902.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 115/140 (82%) | 593 | 1.2e-76
|
| ref|WP_004026220.1| MULTISPECIES: 30S ribosomal protein S12 [Ureaplasma] | 113/138 (81%) | 588 | 6.0e-76
|
| ref|WP_066026735.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 114/140 (81%) | 588 | 8.2e-76
|
| ref|WP_038102564.1| 30S ribosomal protein S12 [Ureaplasma diversum] | 112/136 (82%) | 582 | 5.7e-75
|
| ref|WP_031488941.1| 30S ribosomal protein S12 [Ureaplasma canigenitalium] | 108/131 (82%) | 568 | 9.3e-73
|
Maintained by Jun Ishikawa