General features
| Gene ID | MPN265
|
| Type | CDS
|
| From | 318087
|
| To | 317047
|
| Strand | -
|
| General name | trpS
|
| Definition | tryptophanyl-tRNA synthetase
|
| nt length | 1041
|
| aa length | 346
|
| m.w. | 39079.10
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE4580 trpS tryptophanyl-tRNA synthetase 596908:595901 | 277 | 2.4e-93
|
| mgen | WP_009885680.1 tryptophan--tRNA ligase [Mycoplasma genitalium] | 470 | 1.9e-169
|
| mpul | WP_010925546.1 tryptophan--tRNA ligase [Mycoplasma pulmonis] | 259 | 1.3e-86
|
| mmob | WP_011265021.1 tryptophan--tRNA ligase [Mycoplasma mobile] | 254 | 2.5e-84
|
| mmyc | NP_975353.1 tryptophanyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 261 | 4.2e-87
|
| mgal | WP_080512219.1 tryptophan--tRNA ligase [Mycoplasma gallisepticum] | 280 | 5.3e-94
|
| uure | WP_004025822.1 tryptophan--tRNA ligase [Ureaplasma urealyticum] | 266 | 2.4e-89
|
| phyt | WP_041624959.1 tryptophan--tRNA ligase [Onion yellows phytoplasma] | 212 | 2.9e-68
|
| bsub | NP_389024.1 tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 246 | 1.3e-80
|
| cace | WP_014518857.1 MULTISPECIES: tryptophan--tRNA ligase [Clostridium] | 215 | 1.0e-68
|
| ecoli | NP_417843.1 tryptophan--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 231 | 8.4e-75
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1b | 1 | tRNA synthetases class I (W and Y) | 4-297 | 270.8 | 1.4e-80
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874622.1| tryptophan--tRNA ligase [Mycoplasma pneumoniae] | 346/346 (100%) | 1822 | 0.0e+00
|
| ref|WP_161609419.1| tryptophan--tRNA ligase [Mycoplasma pneumoniae] | 345/346 (99%) | 1817 | 0.0e+00
|
| ref|WP_014325428.1| tryptophan--tRNA ligase [Mycoplasma pneumoniae] | 345/346 (99%) | 1814 | 0.0e+00
|
| ref|WP_014893947.1| tryptophan--tRNA ligase [Mycoplasma genitalium] | 236/342 (69%) | 1211 | 3.8e-164
|
| ref|WP_009885680.1| tryptophan--tRNA ligase [Mycoplasma genitalium] | 235/342 (68%) | 1210 | 6.3e-164
|
| ref|WP_014894399.1| tryptophan--tRNA ligase [Mycoplasma genitalium] | 234/342 (68%) | 1205 | 3.2e-163
|
| ref|WP_027123818.1| tryptophan--tRNA ligase [Mycoplasma pirum] | 163/339 (48%) | 797 | 2.8e-101
|
| ref|WP_027119801.1| tryptophan--tRNA ligase [Mycoplasma testudinis] | 158/339 (46%) | 778 | 2.7e-98
|
| ref|WP_023893711.1| tryptophan--tRNA ligase [Mycoplasma gallisepticum] | 156/339 (46%) | 754 | 8.4e-95
|
| ref|WP_023789017.1| tryptophan--tRNA ligase [Spiroplasma apis] | 155/325 (47%) | 751 | 2.0e-94
|
Maintained by Jun Ishikawa