General features
| Gene ID | MYPE260
|
| Type | CDS
|
| From | 36106
|
| To | 37116
|
| Strand | +
|
| General name |
|
| Definition | ribosomal protein L1
|
| nt length | 1011
|
| aa length | 336
|
| m.w. | 36891.33
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN220 rplA ribosomal protein L1 272462:273142 | 211 | 2.3e-69
|
| mgen | WP_010869323.1 50S ribosomal protein L1 [Mycoplasma genitalium] | 210 | 5.1e-69
|
| mpul | WP_010924814.1 50S ribosomal protein L1 [Mycoplasma pulmonis] | 179 | 7.8e-57
|
| mmob | WP_011264659.1 50S ribosomal protein L1 [Mycoplasma mobile] | 178 | 2.9e-56
|
| mmyc | NP_975962.1 50S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 185 | 5.9e-59
|
| mgal | WP_011113926.1 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 241 | 7.3e-81
|
| uure | WP_004025539.1 50S ribosomal protein L1 [Ureaplasma urealyticum] | 221 | 6.4e-73
|
| phyt | WP_034172138.1 MULTISPECIES: 50S ribosomal protein L1 [Candidatus Phytoplasma asteris] | 198 | 2.1e-64
|
| bsub | NP_387984.2 ribosomal protein L1 (BL1) [Bacillus subtilis subsp. subtilis str. 168] | 190 | 2.7e-60
|
| cace | WP_010966424.1 MULTISPECIES: 50S ribosomal protein L1 [Clostridium] | 171 | 5.3e-53
|
| ecoli | NP_418411.1 50S ribosomal subunit protein L1 [Escherichia coli str. K-12 substr. MG1655] | 160 | 1.8e-48
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L1 | 1 | Ribosomal protein L1p/L10e family | 35-224 | 138.3 | 2.6e-40
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076852.1| 50S ribosomal protein L1 [Mycoplasma penetrans] | 336/336 (100%) | 1708 | 0.0e+00
|
| ref|WP_129374359.1| 50S ribosomal protein L1 [Mycoplasma penetrans] | 335/336 (99%) | 1699 | 0.0e+00
|
| ref|WP_036452078.1| 50S ribosomal protein L1 [Mycoplasma iowae] | 186/304 (61%) | 901 | 2.3e-115
|
| ref|WP_129692708.1| 50S ribosomal protein L1 [Mycoplasma iowae] | 186/319 (58%) | 889 | 9.0e-114
|
| ref|WP_027122232.1| 50S ribosomal protein L1 [Mycoplasma imitans] | 117/214 (54%) | 624 | 4.8e-77
|
| ref|WP_027123761.1| 50S ribosomal protein L1 [Mycoplasma pirum] | 120/213 (56%) | 623 | 6.0e-77
|
| ref|WP_011883459.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 116/214 (54%) | 616 | 7.5e-76
|
| ref|WP_011113926.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 115/214 (53%) | 614 | 1.6e-75
|
| ref|WP_027333328.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 115/214 (53%) | 614 | 1.8e-75
|
| ref|WP_065164866.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 115/214 (53%) | 612 | 3.5e-75
|
Maintained by Jun Ishikawa