General features
| Gene ID | MPN225
|
| Type | CDS
|
| From | 276697
|
| To | 277116
|
| Strand | +
|
| General name | rpsL
|
| Definition | ribosomal protein S12
|
| nt length | 420
|
| aa length | 139
|
| m.w. | 15629.40
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE290 rpsL ribosomal protein S12 39162:39584 | 222 | 1.3e-77
|
| mgen | WP_010869326.1 30S ribosomal protein S12 [Mycoplasma genitalium] | 270 | 6.0e-97
|
| mpul | WP_010925231.1 30S ribosomal protein S12 [Mycoplasma pulmonis] | 187 | 5.7e-64
|
| mmob | WP_011264889.1 30S ribosomal protein S12 [Mycoplasma mobile] | 197 | 5.5e-68
|
| mmyc | NP_975160.3 30S ribosomal protein S12 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 201 | 1.6e-69
|
| mgal | WP_011113788.1 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 238 | 6.5e-84
|
| uure | WP_004026220.1 MULTISPECIES: 30S ribosomal protein S12 [Ureaplasma] | 210 | 3.6e-73
|
| phyt | WP_011160636.1 MULTISPECIES: 30S ribosomal protein S12 [Candidatus Phytoplasma] | 186 | 9.1e-64
|
| bsub | NP_387991.2 ribosomal protein S12 (BS12) [Bacillus subtilis subsp. subtilis str. 168] | 203 | 7.0e-70
|
| cace | WP_010966418.1 MULTISPECIES: 30S ribosomal protein S12 [Clostridium] | 174 | 2.7e-58
|
| ecoli | NP_417801.1 30S ribosomal subunit protein S12 [Escherichia coli str. K-12 substr. MG1655] | 175 | 9.1e-59
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosom_S12_S23 | 1 | Ribosomal protein S12/S23 | 40-136 | 116.3 | 5.2e-34
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874582.1| 30S ribosomal protein S12 [Mycoplasma pneumoniae] | 139/139 (100%) | 714 | 3.7e-95
|
| ref|WP_014325410.1| 30S ribosomal protein S12 [Mycoplasma pneumoniae] | 138/139 (99%) | 709 | 2.0e-94
|
| ref|WP_010869326.1| 30S ribosomal protein S12 [Mycoplasma genitalium] | 133/139 (95%) | 690 | 2.0e-91
|
| ref|WP_027121842.1| 30S ribosomal protein S12 [Mycoplasma imitans] | 118/137 (86%) | 609 | 3.6e-79
|
| ref|WP_011113788.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 117/137 (85%) | 606 | 1.4e-78
|
| ref|WP_065170005.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 116/137 (84%) | 602 | 4.5e-78
|
| ref|WP_151029902.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 116/137 (84%) | 602 | 4.5e-78
|
| ref|WP_066026735.1| 30S ribosomal protein S12 [Mycoplasma gallisepticum] | 115/137 (83%) | 595 | 5.1e-77
|
| ref|WP_011076855.1| 30S ribosomal protein S12 [Mycoplasma penetrans] | 113/138 (81%) | 565 | 2.0e-72
|
| ref|WP_047790969.1| 30S ribosomal protein S12 [Spiroplasma eriocheiris] | 109/139 (78%) | 559 | 1.6e-71
|
Maintained by Jun Ishikawa