General features

Gene IDMYPE2110
TypeCDS
From264155
To265600
Strand+
General namegatB
Definitionglutamyl-tRNA amidotransferase subunit B
nt length1446
aa length481
m.w.55592.60
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN238 pet112 Glu-tRNA(Gln) amidotransferase, subunit B 290256:2916923771.6e-128
mgenWP_009885658.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma genitalium]3812.1e-130
mpulWP_041363972.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma pulmonis]3872.4e-132
mmobWP_011264896.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma mobile]3733.6e-127
mmycNP_975737.1 aspartyl/glutamyl-tRNA amidotransferase subunit B [Mycoplasma mycoides subsp. mycoides SC str. PG1]3587.1e-121
mgalWP_011113865.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma gallisepticum]4573.8e-160
uureWP_012560327.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Ureaplasma urealyticum]4223.9e-146
bsubNP_388551.2 glutamyl-tRNA(Gln) amidotransferase (subunit B) [Bacillus subtilis subsp. subtilis str. 168]3087.3e-101
caceWP_010965957.1 MULTISPECIES: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Clostridium]2594.3e-82
ecoliNP_418467.1 DNA-binding transcriptional repressor LexA [Escherichia coli str. K-12 substr. MG1655]325.1e-02

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

GatB_N1GatB/GatE catalytic domain11-289330.95.7e-99

GatB_Yqey1GatB domain329-477137.23.6e-40

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077038.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...480/481 (99%)25060.0e+00
ref|WP_129374605.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...479/481 (99%)25010.0e+00
ref|WP_050796841.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...320/477 (67%)16410.0e+00
ref|WP_014574754.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...242/481 (50%)11803.1e-155
ref|WP_085062055.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...241/478 (50%)11803.5e-155
ref|WP_011113865.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...241/478 (50%)11778.2e-155
ref|WP_014886221.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...241/478 (50%)11761.2e-154
ref|WP_081275308.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...241/478 (50%)11752.2e-154
ref|WP_027121787.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...239/472 (50%)11691.4e-153
ref|WP_084266129.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Mycoplasma ...235/470 (50%)11431.8e-149

Maintained by Jun Ishikawa