General features
| Gene ID | MYPE2070
|
| Type | CDS
|
| From | 260583
|
| To | 261323
|
| Strand | +
|
| General name | udg
|
| Definition | uracil-DNA glycosylase
|
| nt length | 741
|
| aa length | 246
|
| m.w. | 28897.03
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN235 ung uracil DNA glycosylase 286468:287190 | 107 | 3.5e-30
|
| mgen | WP_014894390.1 uracil-DNA glycosylase [Mycoplasma genitalium] | 103 | 1.8e-28
|
| mmob | WP_083748437.1 uracil-DNA glycosylase [Mycoplasma mobile] | 156 | 5.8e-49
|
| mmyc | NP_975482.1 uracil-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 116 | 2.0e-33
|
| mgal | WP_011113868.1 uracil-DNA glycosylase [Mycoplasma gallisepticum] | 124 | 1.1e-36
|
| uure | WP_004025643.1 uracil-DNA glycosylase [Ureaplasma urealyticum] | 152 | 1.0e-47
|
| phyt | WP_011160538.1 MULTISPECIES: uracil-DNA glycosylase [Candidatus Phytoplasma asteris] | 151 | 2.5e-47
|
| bsub | NP_391676.1 uracil-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] | 161 | 3.3e-50
|
| cace | WP_010966570.1 MULTISPECIES: D-Ala-D-Ala carboxypeptidase VanY [Clostridium] | 28 | 3.6e-01
|
| ecoli | NP_417075.1 uracil-DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] | 133 | 2.2e-39
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| UDG | 1 | Uracil DNA glycosylase superfamily | 84-227 | 72.7 | 3.2e-20
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_044891204.1| uracil-DNA glycosylase [Mycoplasma penetrans] | 222/222 (100%) | 1148 | 3.9e-158
|
| ref|WP_129374603.1| uracil-DNA glycosylase [Mycoplasma penetrans] | 221/222 (99%) | 1141 | 4.3e-157
|
| ref|WP_004025301.1| uracil-DNA glycosylase [Mycoplasma iowae] | 111/213 (52%) | 515 | 7.1e-62
|
| ref|WP_072783127.1| uracil-DNA glycosylase [Duganella sacchari] | 93/214 (43%) | 493 | 1.4e-58
|
| ref|WP_161077901.1| uracil-DNA glycosylase [Duganella sp. CY15W] | 92/214 (42%) | 487 | 1.1e-57
|
| ref|WP_031573824.1| uracil-DNA glycosylase [Proteiniclasticum ruminis] | 96/213 (45%) | 486 | 1.7e-57
|
| ref|WP_152837688.1| uracil-DNA glycosylase [Rugamonas sp. FT29W] | 94/213 (44%) | 486 | 1.7e-57
|
| ref|WP_161015998.1| uracil-DNA glycosylase [Pseudoduganella sp. FT55W] | 92/213 (43%) | 485 | 2.3e-57
|
| ref|WP_154375508.1| uracil-DNA glycosylase [Duganella sp. FT80W] | 94/214 (43%) | 484 | 2.6e-57
|
| ref|WP_090190848.1| MULTISPECIES: uracil-DNA glycosylase [unclassified Duganella] | 92/214 (42%) | 483 | 3.8e-57
|
Maintained by Jun Ishikawa