General features
| Gene ID | MPN177
|
| Type | CDS
|
| From | 224338
|
| To | 224880
|
| Strand | +
|
| General name | rplE
|
| Definition | ribosomal protein L5
|
| nt length | 543
|
| aa length | 180
|
| m.w. | 20239.59
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10050 rplE ribosomal protein L5 1323438:1322875 | 246 | 7.0e-86
|
| mgen | WP_009885847.1 50S ribosomal protein L5 [Mycoplasma genitalium] | 316 | 5.3e-114
|
| mpul | WP_010925376.1 50S ribosomal protein L5 [Mycoplasma pulmonis] | 206 | 2.1e-70
|
| mmob | WP_011264767.1 50S ribosomal protein L5 [Mycoplasma mobile] | 180 | 5.2e-60
|
| mmyc | NP_975708.1 50S ribosomal protein L5 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 214 | 3.4e-73
|
| mgal | WP_011113292.1 50S ribosomal protein L5 [Mycoplasma gallisepticum] | 244 | 5.4e-85
|
| uure | WP_004025603.1 50S ribosomal protein L5 [Ureaplasma urealyticum] | 241 | 3.3e-84
|
| phyt | WP_034172278.1 MULTISPECIES: 50S ribosomal protein L5 [Candidatus Phytoplasma asteris] | 196 | 2.2e-66
|
| bsub | NP_388009.1 ribosomal protein L5 (BL6) [Bacillus subtilis subsp. subtilis str. 168] | 231 | 1.7e-79
|
| cace | WP_010966400.1 MULTISPECIES: 50S ribosomal protein L5 [Clostridium] | 213 | 3.6e-72
|
| ecoli | NP_417767.1 50S ribosomal subunit protein L5 [Escherichia coli str. K-12 substr. MG1655] | 216 | 1.2e-73
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L5_C | 1 | ribosomal L5P family C-terminus | 85-176 | 125.2 | 8.5e-37
|
| Ribosomal_L5 | 1 | Ribosomal protein L5 | 25-80 | 88.4 | 2.9e-25
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874534.1| 50S ribosomal protein L5 [Mycoplasma pneumoniae] | 180/180 (100%) | 943 | 9.0e-129
|
| ref|WP_014574904.1| 50S ribosomal protein L5 [Mycoplasma pneumoniae] | 179/180 (99%) | 939 | 3.5e-128
|
| ref|WP_054175821.1| 50S ribosomal protein L5 [Mycoplasma pneumoniae] | 179/180 (99%) | 939 | 4.3e-128
|
| ref|WP_014894186.1| 50S ribosomal protein L5 [Mycoplasma genitalium] | 148/179 (82%) | 812 | 1.1e-108
|
| ref|WP_009885847.1| 50S ribosomal protein L5 [Mycoplasma genitalium] | 148/179 (82%) | 810 | 1.8e-108
|
| ref|WP_004024692.1| 50S ribosomal protein L5 [Mycoplasma iowae] | 117/178 (65%) | 640 | 2.0e-82
|
| ref|WP_027124209.1| 50S ribosomal protein L5 [Mycoplasma pirum] | 116/165 (70%) | 640 | 2.0e-82
|
| ref|WP_033160186.1| 50S ribosomal protein L5 [Mycoplasma alvi] | 115/160 (71%) | 638 | 4.1e-82
|
| ref|WP_038101538.1| 50S ribosomal protein L5 [Ureaplasma diversum] | 116/179 (64%) | 635 | 8.6e-82
|
| ref|WP_027120098.1| 50S ribosomal protein L5 [Mycoplasma testudinis] | 111/165 (67%) | 630 | 6.3e-81
|
Maintained by Jun Ishikawa