General features
| Gene ID | MYPE1020
|
| Type | CDS
|
| From | 127608
|
| To | 128288
|
| Strand | +
|
| General name | trmD
|
| Definition | tRNA (guanine-N1)-methyltransferase
|
| nt length | 681
|
| aa length | 226
|
| m.w. | 25803.30
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN659 trmD tRNA (guanine-N1)-methyltransferase 784075:783443 | 228 | 1.1e-77
|
| mgen | WP_010869485.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma genitalium] | 252 | 4.2e-87
|
| mpul | WP_010925269.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma pulmonis] | 242 | 6.1e-83
|
| mmob | WP_041362930.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma mobile] | 224 | 2.7e-76
|
| mmyc | NP_975413.1 tRNA (guanine-N(1)-)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 254 | 1.5e-87
|
| mgal | WP_011113884.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma gallisepticum] | 244 | 1.1e-83
|
| uure | WP_004026001.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Ureaplasma urealyticum] | 246 | 8.6e-85
|
| phyt | WP_011160822.1 MULTISPECIES: tRNA (guanosine(37)-N1)-methyltransferase TrmD [Candidatus Phytoplasma asteris] | 219 | 8.7e-74
|
| bsub | NP_389485.1 tRNA(m1G37)methyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 219 | 3.1e-73
|
| cace | WP_010965065.1 MULTISPECIES: tRNA (guanosine(37)-N1)-methyltransferase TrmD [Clostridium] | 229 | 5.9e-77
|
| ecoli | NP_417098.1 tRNA m(1)G37 methyltransferase [Escherichia coli str. K-12 substr. MG1655] | 189 | 3.3e-61
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA_m1G_MT | 1 | tRNA (Guanine-1)-methyltransferase | 23-216 | 212.8 | 3.6e-63
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076929.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma penetrans] | 226/226 (100%) | 1176 | 9.0e-163
|
| ref|WP_036451576.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma iowae] | 140/225 (62%) | 738 | 5.5e-96
|
| ref|WP_102266924.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Massilicoli timonensis... | 127/219 (57%) | 715 | 3.4e-92
|
| ref|WP_118453505.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Dielma fastidiosa] | 126/219 (57%) | 698 | 1.0e-89
|
| ref|WP_022937720.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Dielma fastidiosa] | 126/219 (57%) | 697 | 1.4e-89
|
| ref|WP_071442460.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Traorella massiliensis... | 123/221 (55%) | 696 | 1.9e-89
|
| ref|WP_038103403.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Ureaplasma diversum] | 136/223 (60%) | 690 | 1.2e-88
|
| ref|WP_060691898.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Clostridia bacterium U... | 124/219 (56%) | 690 | 1.6e-88
|
| ref|WP_029473380.1| MULTISPECIES: tRNA (guanosine(37)-N1)-methyltransferase TrmD [Clostrid... | 124/219 (56%) | 689 | 2.5e-88
|
| ref|WP_027120185.1| tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasma testudinis] | 133/224 (59%) | 685 | 1.0e-87
|
Maintained by Jun Ishikawa