General features
| Gene ID | MYPE1010
|
| Type | CDS
|
| From | 127201
|
| To | 127599
|
| Strand | +
|
| General name | rpsP
|
| Definition | ribosomal protein S16
|
| nt length | 399
|
| aa length | 132
|
| m.w. | 14889.34
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN660 rpsP ribosomal protein S16 784407:784141 | 86 | 3.9e-25
|
| mgen | WP_014894702.1 30S ribosomal protein S16 [Mycoplasma genitalium] | 85 | 1.1e-24
|
| mpul | WP_010925270.1 30S ribosomal protein S16 [Mycoplasma pulmonis] | 86 | 4.6e-25
|
| mmob | WP_011264950.1 30S ribosomal protein S16 [Mycoplasma mobile] | 76 | 5.1e-21
|
| mmyc | NP_975411.1 30S ribosomal protein S16 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 102 | 5.0e-31
|
| mgal | WP_011113885.1 30S ribosomal protein S16 [Mycoplasma gallisepticum] | 115 | 2.1e-36
|
| uure | WP_167310319.1 30S ribosomal protein S16 [Ureaplasma urealyticum] | 105 | 2.6e-32
|
| phyt | WP_011160823.1 MULTISPECIES: 30S ribosomal protein S16 [Candidatus Phytoplasma] | 63 | 4.5e-16
|
| bsub | NP_389481.1 ribosomal protein S16 (BS17) [Bacillus subtilis subsp. subtilis str. 168] | 101 | 3.5e-30
|
| cace | WP_010965062.1 MULTISPECIES: 30S ribosomal protein S16 [Clostridium] | 82 | 9.7e-23
|
| ecoli | NP_417100.1 30S ribosomal subunit protein S16 [Escherichia coli str. K-12 substr. MG1655] | 58 | 2.5e-13
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S16 | 1 | Ribosomal protein S16 | 8-64 | 72.9 | 1.6e-20
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076928.1| 30S ribosomal protein S16 [Mycoplasma penetrans] | 132/132 (100%) | 675 | 2.2e-89
|
| ref|WP_004025134.1| 30S ribosomal protein S16 [Mycoplasma iowae] | 57/88 (64%) | 331 | 3.9e-37
|
| ref|WP_036451578.1| 30S ribosomal protein S16 [Mycoplasma iowae] | 57/88 (64%) | 330 | 5.3e-37
|
| ref|WP_094049343.1| 30S ribosomal protein S16 [Spiroplasma corruscae] | 65/127 (51%) | 301 | 3.3e-32
|
| ref|WP_027121768.1| 30S ribosomal protein S16 [Mycoplasma imitans] | 51/88 (57%) | 295 | 4.2e-32
|
| ref|WP_023893729.1| 30S ribosomal protein S16 [Mycoplasma gallisepticum] | 49/84 (58%) | 292 | 1.2e-31
|
| ref|WP_011113885.1| 30S ribosomal protein S16 [Mycoplasma gallisepticum] | 49/84 (58%) | 288 | 4.5e-31
|
| ref|WP_014574763.1| 30S ribosomal protein S16 [Mycoplasma gallisepticum] | 49/84 (58%) | 288 | 4.9e-31
|
| ref|WP_020834118.1| 30S ribosomal protein S16 [Spiroplasma taiwanense] | 60/121 (49%) | 286 | 3.6e-30
|
| ref|WP_156940245.1| 30S ribosomal protein S16 [Mycoplasma alvi] | 49/86 (56%) | 280 | 8.8e-30
|
Maintained by Jun Ishikawa