General features
| Gene ID | MYPE10000
|
| Type | CDS
|
| From | 1321317
|
| To | 1320613
|
| Strand | -
|
| General name | rpsE
|
| Definition | ribosomal protein S5
|
| nt length | 705
|
| aa length | 234
|
| m.w. | 25734.96
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN182 rpsE ribosomal protein S5 226405:227064 | 193 | 8.3e-64
|
| mgen | WP_009885854.1 30S ribosomal protein S5 [Mycoplasma genitalium] | 193 | 4.5e-64
|
| mpul | WP_010925371.1 30S ribosomal protein S5 [Mycoplasma pulmonis] | 146 | 3.0e-45
|
| mmob | WP_083748451.1 30S ribosomal protein S5 [Mycoplasma mobile] | 135 | 2.2e-41
|
| mmyc | NP_975704.1 30S ribosomal protein S5 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 155 | 2.6e-48
|
| mgal | WP_011113297.1 30S ribosomal protein S5 [Mycoplasma gallisepticum] | 217 | 5.6e-73
|
| uure | WP_004026225.1 30S ribosomal protein S5 [Ureaplasma urealyticum] | 206 | 6.1e-69
|
| phyt | WP_011160592.1 MULTISPECIES: 30S ribosomal protein S5 [Candidatus Phytoplasma] | 138 | 3.8e-43
|
| bsub | NP_388014.1 ribosomal protein S5 [Bacillus subtilis subsp. subtilis str. 168] | 171 | 5.1e-55
|
| cace | WP_010966395.1 MULTISPECIES: 30S ribosomal protein S5 [Clostridium] | 158 | 3.4e-50
|
| ecoli | NP_417762.1 30S ribosomal subunit protein S5 [Escherichia coli str. K-12 substr. MG1655] | 146 | 3.0e-45
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S5_C | 1 | Ribosomal protein S5, C-terminal domain | 155-225 | 95.1 | 1.2e-27
|
| Ribosomal_S5 | 1 | Ribosomal protein S5, N-terminal domain | 78-142 | 87.7 | 3.6e-25
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077814.1| 30S ribosomal protein S5 [Mycoplasma penetrans] | 234/234 (100%) | 1200 | 4.4e-166
|
| ref|WP_004024687.1| 30S ribosomal protein S5 [Mycoplasma iowae] | 143/223 (64%) | 672 | 4.5e-86
|
| ref|WP_036452336.1| 30S ribosomal protein S5 [Mycoplasma iowae] | 142/223 (63%) | 665 | 5.5e-85
|
| ref|WP_027122191.1| 30S ribosomal protein S5 [Mycoplasma imitans] | 120/232 (51%) | 570 | 1.8e-70
|
| ref|WP_014886618.1| 30S ribosomal protein S5 [Mycoplasma gallisepticum] | 117/213 (54%) | 569 | 2.4e-70
|
| ref|WP_014885811.1| 30S ribosomal protein S5 [Mycoplasma gallisepticum] | 117/213 (54%) | 568 | 4.0e-70
|
| ref|WP_011883713.1| 30S ribosomal protein S5 [Mycoplasma gallisepticum] | 116/213 (54%) | 563 | 2.7e-69
|
| ref|WP_011113297.1| 30S ribosomal protein S5 [Mycoplasma gallisepticum] | 115/213 (53%) | 552 | 1.2e-67
|
| ref|WP_036433738.1| 30S ribosomal protein S5 [Mycoplasma alvi] | 96/164 (58%) | 532 | 6.6e-65
|
| ref|WP_027124204.1| 30S ribosomal protein S5 [Mycoplasma pirum] | 92/155 (59%) | 531 | 7.2e-65
|
Maintained by Jun Ishikawa