General features

Gene IDMPN016
TypeCDS
From18205
To17339
Strand-
General namerimK
Definitionribosomal S6 modification protein-like
nt length867
aa length288
m.w.32434.96
COG[HJ]


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE9890 pepC aminopeptidase C 1313186:1311717251.1e+00
mgenWP_010869289.1 RimK family alpha-L-glutamate ligase [Mycoplasma genitalium]4102.1e-147
bsubNP_388105.1 phosphoribosylglycinamide formyltransferase 2 [Bacillus subtilis subsp. subtilis str. 168]316.2e-02
ecoliNP_415373.1 ribosomal protein S6 modification protein [Escherichia coli str. K-12 substr. MG1655]849.5e-20

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

RimK1RimK-like ATP-grasp domain90-287280.45.9e-84

GSH-S_ATP1Prokaryotic glutathione synthetase, ATP-grasp domain125-25050.71.3e-13

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874373.1| RimK family alpha-L-glutamate ligase [Mycoplasma pneumoniae] 288/288 (100%)15200.0e+00
ref|WP_159204227.1| RimK family alpha-L-glutamate ligase [Mycoplasma pneumoniae]287/288 (99%)15130.0e+00
ref|WP_014894094.1| RimK family alpha-L-glutamate ligase [Mycoplasma genitalium]198/287 (68%)10553.1e-142
ref|WP_010869289.1| RimK family alpha-L-glutamate ligase [Mycoplasma genitalium]198/287 (68%)10536.9e-142
ref|WP_027119785.1| RimK family alpha-L-glutamate ligase [Mycoplasma testudinis]122/285 (42%)5273.8e-62
ref|WP_052664000.1| RimK family alpha-L-glutamate ligase [Mycoplasma alvi]118/286 (41%)4673.8e-53
ref|WP_052663035.1| hypothetical protein [Mycoplasma pirum]108/284 (38%)4632.1e-52
ref|WP_124754045.1| RimK family alpha-L-glutamate ligase [Clostridiales bacterium COT073_C...91/237 (38%)3934.7e-42
ref|WP_155878568.1| RimK family alpha-L-glutamate ligase [Lachnospiraceae bacterium KM106-...87/228 (38%)3761.3e-39
ref|WP_089853791.1| RimK family alpha-L-glutamate ligase [Halolactibacillus miurensis]80/209 (38%)3717.1e-39


Maintained by Jun Ishikawa