General features

Gene IDMPN007
TypeCDS
From9184
To9945
Strand+
General nameholB
DefinitionDNA-polymerase-like protein
nt length762
aa length253
m.w.29056.30
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE8130 DNA polymerase III subunit delta 1091691:1090864928.8e-24
mgenWP_009885556.1 DNA polymerase III subunit delta' [Mycoplasma genitalium]2953.9e-103
mmobWP_011265046.1 DNA polymerase III subunit delta' [Mycoplasma mobile]461.1e-07
mmycNP_975056.1 DNA polymerase III subunit delta [Mycoplasma mycoides subsp. mycoides SC str. PG1]558.3e-11
mgalWP_011113983.1 DNA polymerase III subunit delta' [Mycoplasma gallisepticum]822.3e-20
uureWP_004027064.1 DNA polymerase III subunit delta [Ureaplasma urealyticum]533.8e-10
phytWP_011160606.1 MULTISPECIES: DNA polymerase III subunit delta' [Candidatus Phytoplasma asteris]467.9e-08

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

DNA_pol3_delta21DNA polymerase III, delta subunit5-14192.42.5e-26

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874364.1| DNA polymerase III subunit delta' [Mycoplasma pneumoniae] 253/253 (100%)13430.0e+00
ref|WP_161609367.1| DNA polymerase III subunit delta' [Mycoplasma pneumoniae]252/253 (99%)13380.0e+00
ref|WP_014574840.1| DNA polymerase III subunit delta' [Mycoplasma pneumoniae]252/253 (99%)13380.0e+00
ref|WP_009885556.1| DNA polymerase III subunit delta' [Mycoplasma genitalium]132/253 (52%)7541.3e-97
ref|WP_014893890.1| DNA polymerase III subunit delta' [Mycoplasma genitalium]131/253 (51%)7462.5e-96
ref|WP_027123733.1| hypothetical protein [Mycoplasma pirum]78/248 (31%)3101.4e-30
ref|WP_027119757.1| hypothetical protein [Mycoplasma testudinis]75/247 (30%)3059.5e-30
ref|WP_052664016.1| DNA polymerase III subunit delta' [Mycoplasma alvi]71/245 (28%)2719.5e-25
ref|WP_117810049.1| MULTISPECIES: hypothetical protein [unclassified Coprobacillus]53/173 (30%)2483.9e-21
ref|WP_106987561.1| MULTISPECIES: hypothetical protein [Erysipelotrichaceae]53/173 (30%)2483.9e-21

Maintained by Jun Ishikawa