Last updated: Tuesday, 19-May-2020 15:31:55 JST
Mycoplasma penetrans Genome

What's new?

2020-05-11: Updated annotation for many genes.
2020-04-01: Updated all BLASTP and Pfam results.
2020-04-01: This page has been moved here.
2020-03-27: Updated all BLASTP and Pfam results.
2008-07-03: Updated Other genome projects for Mollicutes
2006-03-14: Updated all BLASTP and Pfam results.
2005-09-22: Updated all BLASTP and Pfam results.

About this project

General features of the genome

Genome size1,358,633bp
G+C content25.7%
Protein-coding gene1,038
rRNA gene (5S-23S-16S)1
tRNA gene30
P35 homologue44 (tree)

Browse Genome

1-100,001 100,001-200,001 200,001-300,001 300,001-400,001 400,001-500,001 500,001-600,001 600,001-700,001 700,001-800,001 800,001-900,001 900,001-1,000,001 1,000,001-1,100,001 1,100,001-1,200,001 1,200,001-1,300,001 1,300,001-1

Search Genome

Molecule: Keyword:
 case sensitive
(You can use perl regular expression.)

List of All Genes

Ortholog table

BLAST Search

Download the sequences

Complete nucleotide sequence (FASTA format)
Protein sequences (multiple FASTA format)
Annotation table (TAB-separated text)

Publication

Sasaki, Y., J. Ishikawa, A. Yamashita, K. Oshima, T. Kenri, K. Furuya, C. Yoshino, A. Horino, T. Shiba, T. Sasaki and M. Hattori: The complete genomic sequence of Mycoplasma penetrans, an intracellular bacterial pathogen in humans. Nucleic Acids Research 30(23):5293–5300 (2002) [abstract | full-text | PDF]
Supplementary information:
P35 homologue: [ table | tree ]
Original high resolution genome map:
JPEG ( 300dpi (430 Kbytes) | 600dpi (1.2 Mbytes) ), PostScript
The sequence is available under accession number: BA000026,
Horino, A., Y. Sasaki, T. Sasaki, and T. Kenri: Multiple promoter inversions generate surface antigenic variation in Mycoplasma penetrans. Journal of Bacteriology 185(1): 231–242 (2003). [abstract | full-text | PDF]
Sasaki Y.: Chapter 10 "Mycoplasma", p. 175–190, In V. L. Chan, P. M. Sherman and B. Bourke (eds.) "Bacterial Genomes and infectious Diseases", Humana Press, Totowa, NJ, 2006, ISBN: 158829496X

Other Genome Projects for Mollicutes

Correspondence to: Y. Sasaki